Comments (3)
bayraktar1
commented on June 1, 2024
I installed the dependencies listed on the main page manually into my conda env, and it fixed the error
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oschwengers
commented on June 1, 2024
Hi @bayraktar1 , glad to hear that it's working. Just in case: available memory is also a regular cause of such errors.
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jpaganini
commented on June 1, 2024
As @oschwengers, I got the exact same error due to lack of memory (I was requesting 8GBs). Requesting 20G fixed it.
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Related Issues (20)
- Blast contig results HOT 7
- Permission denied: 'prodigal' HOT 1
- The number of contigs in plasmid.fasta is not the same as the number of contigs in .tsv HOT 3
- Differences between .log and plasmid.fasta file HOT 3
- --meta missing HOT 2
- RDS is always 0.0 HOT 7
- Trouble testing on chromosomes HOT 9
- Platon report Mobilization and Conjugation HOT 2
- IndexError: list index out of range error HOT 1
- genome fasta file UNRECOGNIZED HOT 5
- Where can we find version of the RefSeq plasmid database used? HOT 1
- Strange output - is it normal? HOT 2
- Any plans for enabling user to use custom database like COMPASS HOT 1
- Option to see the 'hits' in the results HOT 1
- execution problem HOT 3
- diamond version HOT 2
- Error: No module named 'platon.platon' As #21
- "Marker protein search failed!" error after execution HOT 9
- Platon for long-read contigs? HOT 2
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