Comments (4)
It looks like numSamples
and numChannels
were being loaded as length-1 arrays, rather than integers. I just pushed a fix that should solve your problem. Can you try loading the .spikes file with the latest version of OpenEphys.py?
from analysis-tools.
It looks like there might be a problem with OpenEphys.py.
Try changing that last line to:
waveforms = np.fromfile(f, np.dtype('<u2'), int(numChannels*numSamples))
Also, do you know what version of Python are you using?
from analysis-tools.
Yes I tried that already. The outcome is the same issue, but in the next line... and so on. So that is why I think there is some systematic problem. I copied the exact code that is available here on GitHub in the Python 3 folder.
I am using Python 3.6.4
Thank you for your response.
from analysis-tools.
The new version works! Thank you very much!
from analysis-tools.
Related Issues (20)
- Splitting and Merging .dat Files HOT 3
- Trouble loading events data in matlab when saving in flat binary format with the updated GUI: load_open_ephys_binary.m looks for channels.npy HOT 3
- Binary dat files to Plexon Offline sorter HOT 7
- Failing to read metadata.npy for TTL events in this specific setup HOT 4
- Converting continuous.dat into SpikeGLX flat binary HOT 4
- data and timestamp length unequal using load_open_ephys_binary HOT 4
- Session? HOT 1
- Flat binary file has more/less samples than expected HOT 4
- How to convert .continuous format to flat binary for using in Klusta HOT 1
- How to display the specific time point for spikes ? HOT 1
- load_open_ephys_data_faster.m memory error HOT 5
- Import continuous data recorded by neuropixels HOT 11
- Opening the binary data HOT 4
- issue running TT openephys data recorded in binary to Mclust
- Using analysis tools in Jupyter Notebook HOT 4
- Merging multiple OpenEphys binary (continuous.dat) files HOT 1
- Info Channel Header Location HOT 2
- Missing Probeinterface file for Neuropixel 1.0 (Open Ephys)
- recovering timestamps HOT 1
- OEP v0.6.2 Python KeyError: 'source_processor_sub_idx HOT 3
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from analysis-tools.