Comments (4)
I see. We will try to fix this soon.
Interestingly, the page of the example also includes figure image reference:
<foaf:depicted_by rdf:resource="http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg"/>
Probably we can try to use this example to show the image.
Thanks,
Oliver
From: Chris Mungall [[email protected]]
Sent: Thursday, May 15, 2014 9:19 PM
To: ontoden/ontobee
Subject: [ontobee] URIs as annotation values not showing up (#13)
Example:
http://purl.obolibrary.org/obo/UBERON_0001882
The database_cross_references field shows all values of this property that are literals.
but not IRIs. Underlying OWL:
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0001882">
...
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">nucleus accumbens/rdfs:label
<oboInOwl:hasDbXref rdf:resource="http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=277"/>
<oboInOwl:hasDbXref rdf:resource="http://en.wikipedia.org/wiki/Nucleus_accumbens"/>
<oboInOwl:hasDbXref rdf:resource="http://ncicb.nci.nih.gov/xml/owl/EVS/Accumbens_Nucleus"/>
<oboInOwl:hasDbXref rdf:resource="http://uri.neuinfo.org/nif/nifstd/birnlex_727"/>
—
Reply to this email directly or view it on GitHubhttps://github.com//issues/13.
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from ontobee.
Images would be great
There's something odd to do with the character escaping in this example
- try cerebellum for an image that works
On 15 May 2014, at 18:37, ontoden wrote:
I see. We will try to fix this soon.
Interestingly, the page of the example also includes figure image
reference:<foaf:depicted_by
rdf:resource="http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg"/>Probably we can try to use this example to show the image.
Thanks,
Oliver
From: Chris Mungall [[email protected]]
Sent: Thursday, May 15, 2014 9:19 PM
To: ontoden/ontobee
Subject: [ontobee] URIs as annotation values not showing up (#13)Example:
http://purl.obolibrary.org/obo/UBERON_0001882The database_cross_references field shows all values of this property
that are literals.but not IRIs. Underlying OWL:
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0001882">
...
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">nucleus
accumbens/rdfs:label
<oboInOwl:hasDbXref
rdf:resource="http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=277"/>
<oboInOwl:hasDbXref
rdf:resource="http://en.wikipedia.org/wiki/Nucleus_accumbens"/>
<oboInOwl:hasDbXref
rdf:resource="http://ncicb.nci.nih.gov/xml/owl/EVS/Accumbens_Nucleus"/>
<oboInOwl:hasDbXref
rdf:resource="http://uri.neuinfo.org/nif/nifstd/birnlex_727"/>—
Reply to this email directly or view it on
GitHubhttps://github.com//issues/13.
Electronic Mail is not secure, may not be read every day, and should
not be used for urgent or sensitive issues
Reply to this email directly or view it on GitHub:
#13 (comment)
from ontobee.
Hi Chris,
Bin in my lab has made it happen: now we can see the images in Ontobee:
http://www.ontobee.org/browser/rdf.php?o=UBERON&iri=http://purl.obolibrary.org/obo/UBERON_0001882
more examples:
http://purl.obolibrary.org/obo/UBERON_0001874
http://purl.obolibrary.org/obo/UBERON_0001875
http://purl.obolibrary.org/obo/UBERON_0002741
The other issue about the database_cross_references has also seen solved.
Please check out.
Best,
Oliver
From: Chris Mungall [mailto:[email protected]]
Sent: Friday, May 16, 2014 12:18 AM
To: ontoden/ontobee
Cc: ontoden
Subject: Re: [ontobee] URIs as annotation values not showing up (#13)
Images would be great
There's something odd to do with the character escaping in this example
- try cerebellum for an image that works
On 15 May 2014, at 18:37, ontoden wrote:
I see. We will try to fix this soon.
Interestingly, the page of the example also includes figure image
reference:<foaf:depicted_by
rdf:resource="http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg"/>Probably we can try to use this example to show the image.
Thanks,
Oliver
From: Chris Mungall [[email protected]]
Sent: Thursday, May 15, 2014 9:19 PM
To: ontoden/ontobee
Subject: [ontobee] URIs as annotation values not showing up (#13)Example:
http://purl.obolibrary.org/obo/UBERON_0001882The database_cross_references field shows all values of this property
that are literals.but not IRIs. Underlying OWL:
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0001882">
...
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">nucleus
accumbens/rdfs:label
<oboInOwl:hasDbXref
rdf:resource="http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=277"/>
<oboInOwl:hasDbXref
rdf:resource="http://en.wikipedia.org/wiki/Nucleus_accumbens"/>
<oboInOwl:hasDbXref
rdf:resource="http://ncicb.nci.nih.gov/xml/owl/EVS/Accumbens_Nucleus"/>
<oboInOwl:hasDbXref
rdf:resource="http://uri.neuinfo.org/nif/nifstd/birnlex_727"/>—
Reply to this email directly or view it on
GitHubhttps://github.com//issues/13.
Electronic Mail is not secure, may not be read every day, and should
not be used for urgent or sensitive issues
Reply to this email directly or view it on GitHub:
#13 (comment)
—
Reply to this email directly or view it on GitHubhttps://github.com//issues/13#issuecomment-43295305.
Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues
from ontobee.
Great work Bin! Very nice!
I see there are duplicates but this is a problem on my end, will fix.
On 19 May 2014, at 12:28, He, Yongqun wrote:
Hi Chris,
Bin in my lab has made it happen: now we can see the images in
Ontobee:http://www.ontobee.org/browser/rdf.php?o=UBERON&iri=http://purl.obolibrary.org/obo/UBERON_0001882
more examples:
http://purl.obolibrary.org/obo/UBERON_0001874
http://purl.obolibrary.org/obo/UBERON_0001875
http://purl.obolibrary.org/obo/UBERON_0002741The other issue about the database_cross_references has also seen
solved.Please check out.
Best,
Oliver
From: Chris Mungall [mailto:[email protected]]
Sent: Friday, May 16, 2014 12:18 AM
To: ontoden/ontobee
Cc: ontoden
Subject: Re: [ontobee] URIs as annotation values not showing up (#13)Images would be great
There's something odd to do with the character escaping in this
example
- try cerebellum for an image that works
On 15 May 2014, at 18:37, ontoden wrote:
I see. We will try to fix this soon.
Interestingly, the page of the example also includes figure image
reference:<foaf:depicted_by
rdf:resource="http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg"/>Probably we can try to use this example to show the image.
Thanks,
Oliver
From: Chris Mungall [[email protected]]
Sent: Thursday, May 15, 2014 9:19 PM
To: ontoden/ontobee
Subject: [ontobee] URIs as annotation values not showing up (#13)Example:
http://purl.obolibrary.org/obo/UBERON_0001882The database_cross_references field shows all values of this property
that are literals.but not IRIs. Underlying OWL:
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0001882">
...
<rdfs:label
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">nucleus
accumbens/rdfs:label
<oboInOwl:hasDbXref
rdf:resource="http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=277"/>
<oboInOwl:hasDbXref
rdf:resource="http://en.wikipedia.org/wiki/Nucleus_accumbens"/>
<oboInOwl:hasDbXref
rdf:resource="http://ncicb.nci.nih.gov/xml/owl/EVS/Accumbens_Nucleus"/>
<oboInOwl:hasDbXref
rdf:resource="http://uri.neuinfo.org/nif/nifstd/birnlex_727"/>—
Reply to this email directly or view it on
GitHubhttps://github.com//issues/13.
Electronic Mail is not secure, may not be read every day, and should
not be used for urgent or sensitive issues
Reply to this email directly or view it on GitHub:
#13 (comment)—
Reply to this email directly or view it on
GitHubhttps://github.com//issues/13#issuecomment-43295305.
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