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a-puzzle-a-day-solver

A-Puzzle-A-Day solver

bargelloquilt

An R Shiny App to aid in designing Bargello quilts

bc

This repository is now frozen - please see the note below.

bioc_dockerfiles

A collection of Dockerfiles for some individual bioconductor packages

colorgen

CoLoRGen: comprehensive long read genotyping pipeline.

containers

Bioinformatics containers

contibait

eos

Eos - engine for EVE Online fitting tool.

gatk4-germline-snps-indels

Workflows for germline short variant discovery with GATK4

ggplot2

An implementation of the Grammar of Graphics in R

goldrush

Linear-time de novo Long Read Assembler

linuxbrew

A fork of Homebrew for Linux

markdown-cv

a simple template to write your CV in a readable markdown file and use CSS to publish/print it.

mavis

Merging, Annotation, Validation, and Illustration of Structural variants

medg505_wikipedia

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

multiqc_testdata

Test data for MultiQC. See https://github.com/ewels/MultiQC

mybiocstats

A little rmd I threw together to create some useful stats for the Bioconductor packages I've authored, such as total downloads over time and exact ranking. This should be easy for anyone to use by simply changing the list of packages to compare.

ncov

Nextstrain build for novel coronavirus (nCoV)

oneillkza.github.io

Web space for CV

peng_data_analysis_diagram

pyfa

r-tidybioc-img

Build a docker image with latest R and packages from tidyverse, Bioconductor and friends.

r_workshops

Introductory R workshops for lab biologists, given as a series by GraSPoDS

rexcel

Extracts spreadsheet data from Excel workbooks and puts into linen format

screw

SCREW: A Reproducible Workflow for Single-Cell Epigenomics

simlr

Single-cell Interpretation via Multi-kernel Learning (R code in master branch, Matlab code in matlab branch)

travis_r_test