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Name: Olga Botvinnik
Type: User
Company: @BridgeBioAnalytics
Bio: peppy computational biologist
Twitter: olgabot
Location: San Francisco, CA
Blog: www.olgabotvinnik.com
Name: Olga Botvinnik
Type: User
Company: @BridgeBioAnalytics
Bio: peppy computational biologist
Twitter: olgabot
Location: San Francisco, CA
Blog: www.olgabotvinnik.com
Pairwise similarity metrics for 10x barcoded RNASeq datasets
Strategies for leveraging workflow systems to streamline large-scale biological analyses
Structural homology between C. elegans Ced9 and human BCL2
Code for cross-species and uTAR sequence homology analyses for two Tabula Microcebus papers
Do sourmash multigather, but use a background k-mer distribution model to quantify significance of matches, and report all matching k-mer sequences
Search multiple query k-mer signatures against a database
abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ
Code to perform homolog detectability analyses as described in Weisman et al. 2020 (https://www.biorxiv.org/content/10.1101/2020.02.27.968420v1)
Open source code for AlphaFold.
:raising_hand: Ask @notwaldorf anything!
Anchor: Find bimodal, unimodal, and multimodal features in your data
:sunglasses: Curated list of awesome lists
Examples of great academic lab expectations, manuals, policies for joining and being in the lab
A curated list of nextflow based pipelines
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
a pure Python multi-version tolerant, runtime and OS-agnostic Binary Alignment Map (BAM) file parser and random access tool
A powerful toolset for genome arithmetic.
Repository to test bedtools flank/fasta/strand confusion
Conda recipes for the bioconda channel.
Utilities for building and managing bioconda recipes
biogo is a bioinformatics library for Go
Repo for BioinformaticsBeyonce twitch stream code
Code and notebooks for BIOM262
Node.js interface to the GSNAP spliced aligner for RNA-Seq
Node.js module for working with the NCBI API (aka e-utils).
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.