Comments (1)
Thanks for sharing this idea @TomWhite-MedStar ! This is on theme with the higher level ideas we've been discussing around minimizing unnecessary repetition within & across DQD runs, and performance in general.
We'll probably prioritize the broader overhaul of DQD workflow we were discussing in the Hackathon yesterday before considering any major changes to the check SQL & results/reporting like this one. It's possible we'll address these same requirements differently once we've changed the check execution workflow. And rethinking cohort-level execution will fit in well with subsequent work we hope to do on study/cohort-level data quality. I'll certainly keep this in the backlog to revisit later on!
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Related Issues (20)
- exectuteDqChecks fails if cdm_source table has more than one row and outputFile is left as default HOT 7
- Make executeDqChecks return value invisible
- plausibleDuringLife overcounts numerator if there are multiple DEATH records for a person
- In Getting Started code to run, cdmVersion set but not passed into executeDqChecks HOT 1
- Parameters in SQL scripts cause errors in the following checks: cdmField, cdmDatatype, isForeignKey, isPrimaryKey, isRequired, plausibleValueHigh, plausibleValueLow, cdmTable, measurePersonCompleteness HOT 6
- Refers to non-existing cohort_definition table in results schema HOT 2
- Please update unit tests to use CDM54 schema HOT 2
- enhancement request: add checks of CDM *_datetime fields
- Allow the situation when Condition Era is not built from Condition occurrence where condition_concept_id =0 HOT 2
- New drug exposure check: daily drug dose
- Update check type descriptions & add user guidance
- Use gender specific concept set to check the correctness of gender HOT 4
- New check request: overlapping observation periods HOT 1
- Max allowed number of refills should be up to 24 HOT 4
- The number and percent of records with a value in the QUANTITY field of the DRUG_EXPOSURE table greater than 1095. (threshold 1%) - should be checked only for solid forms HOT 1
- Modify the check: The number and percent of records with a value in the OBSERVATION_PERIOD_START_DATE field of the OBSERVATION_PERIOD that occurs prior to the date in the BIRTH_DATETIME field of the PERSON table. HOT 2
- Make DQD available on CRAN HOT 2
- Add a check on concept_id length HOT 1
- DQD reports on SOURCE_TO_CONCEPT_MAP but table is deprecated HOT 3
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