Comments (3)
@trey-stafford I spent a minute trying to replicate this. I:
- Removed the line from
Dockerfile
which installsmamba
- Built the image
docker-compose up
.
The Luigi scheduler successfully started with no error. Is there something else I should be trying to replicate the error?
from qgreenland.
Perhaps we can just remove the line that installs mamba. To replicate, the step that installs mamba
has to come before the step that installs dependencies from conda lock. Revert the changes in #547 to replicate:
$ docker compose up
[+] Building 0.0s (0/0)
[+] Running 3/3
✔ Network qgreenland_default Created 0.1s
✔ Container luigi Created 0.0s
✔ Container webserver Created 0.0s
Attaching to luigi, webserver
webserver | /docker-entrypoint.sh: /docker-entrypoint.d/ is not empty, will attempt to perform configuration
webserver | /docker-entrypoint.sh: Looking for shell scripts in /docker-entrypoint.d/
webserver | /docker-entrypoint.sh: Launching /docker-entrypoint.d/10-listen-on-ipv6-by-default.sh
webserver | 10-listen-on-ipv6-by-default.sh: info: can not modify /etc/nginx/conf.d/default.conf (read-only file system?)
webserver | /docker-entrypoint.sh: Launching /docker-entrypoint.d/20-envsubst-on-templates.sh
webserver | /docker-entrypoint.sh: Launching /docker-entrypoint.d/30-tune-worker-processes.sh
webserver | /docker-entrypoint.sh: Configuration complete; ready for start up
luigi | Traceback (most recent call last):
luigi | File "/opt/conda/bin/mamba", line 7, in <module>
luigi | from mamba.mamba import main
luigi | ModuleNotFoundError: No module named 'mamba'
luigi exited with code 0
luigi | Traceback (most recent call last):
luigi | File "/opt/conda/bin/mamba", line 7, in <module>
luigi | from mamba.mamba import main
luigi | ModuleNotFoundError: No module named 'mamba'
luigi exited with code 0
luigi | Traceback (most recent call last):
luigi | File "/opt/conda/bin/mamba", line 7, in <module>
luigi | from mamba.mamba import main
luigi | ModuleNotFoundError: No module named 'mamba'
luigi exited with code 1
luigi | Traceback (most recent call last):
luigi | File "/opt/conda/bin/mamba", line 7, in <module>
luigi | from mamba.mamba import main
luigi | ModuleNotFoundError: No module named 'mamba'
luigi exited with code 1
luigi | Traceback (most recent call last):
luigi | File "/opt/conda/bin/mamba", line 7, in <module>
luigi | from mamba.mamba import main
luigi | ModuleNotFoundError: No module named 'mamba'
luigi exited with code 1
from qgreenland.
Got it. Yes, I think removing the line that installs mamba
and conda
is the solution also. I don't know why it was there in the first place :) Must be vestigial from using a much earlier version of micromamba, or perhaps before we started using micromamba?
I also don't know why the container would look for mamba at start-up time... maybe when we installed mamba some setup scripts or alterations to .bashrc
were applied, and then when we bootstrapped with conda-lock
, we blew away mamba
? 🤷
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