Comments (2)
Hi Daniela,
You can download the MassIVE-KB train, validation and test splits used for Casanovo training from here: https://noble.gs.washington.edu/~melih/mskb_casanovo_splits.zip
Zipped archive contains three MGF files corresponding to each of the splits and a parquet file with metadata.
For future reference, the dataset will be temporarily available at this URL and we'll find a permanent home for it soon.
from casanovo.
Thank you :)
from casanovo.
Related Issues (20)
- Exclude some PTMs for prediction? HOT 2
- Question about tracking spectra from MGF files in output HOT 1
- Using HDF5 file as train/val dataset leads to index out of bound error HOT 9
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- Save final model HOT 1
- how to train casanovo v4 on huge dataset like massive-kb from scratch? HOT 3
- What is the criteria of saving the top k models in Casanovo version 4? HOT 1
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- Automate mzTab validation HOT 7
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