Comments (8)
edwardhartnett
commented on July 30, 2024
1
Both 4.9.0 and 4.9.1 are backward compatible. So both should work.
But yesterday Hang mentioned some problem with running the UFS and netcdf-c-4.9.0. I don't have the details.
Certainly we should use 4.9.1, it has bugfixes in the quantize/compress code, and we want those.
from hpc-stack.
Hang-Lei-NOAA
commented on July 30, 2024
@junwang-noaa According to the discussion with @edwardhartnett, the release of netcdf-c-4.9.1 may wait for months. So, we have installed the hdf5/1.14.0 with netcdf-c-4.9.0 series (netcdf-fortran4.6.0; netcdf-cxx 4.3.1) and associated mapl etc libs on Hera and Acorn.
Hera location (hpc-stack loading) :
/scratch2/NCEPDEV/nwprod/hpc-stack/libs/hpc-stack-gfsv16
Acorn location:
module use /lfs/h1/emc/nceplibs/noscrub/Hang.Lei/works/libs/modulefiles/mpi/intel/19.1.3.304/cray-mpich/8.1.9
from hpc-stack.
junwang-noaa
commented on July 30, 2024
@Hang-Lei-NOAA Thank you for installing the library on hera/acorn. Please let us know when the library is available on wcoss2.
@DusanJovic-NOAA FYI.
from hpc-stack.
Hang-Lei-NOAA
commented on July 30, 2024
If we need to deliver the netcdf and hdf5 code to NCO for installation, two
concerns:
1, Please UFS test them and make sure these are working fine. and confirmed
with me, then I will start the delivery.
2, There may have conflicts with existing netcdf/4.9.0, which already
installed on wcoss2. We need communicate with them on how to deal with this.
…On Wed, Feb 1, 2023 at 7:42 AM Jun Wang ***@***.***> wrote:
@Hang-Lei-NOAA <https://github.com/Hang-Lei-NOAA> Thank you for
installing the library on hera/acorn. Please let us know when the library
is available on wcoss2.
@DusanJovic-NOAA <https://github.com/DusanJovic-NOAA> FYI.
—
Reply to this email directly, view it on GitHub
<#513 (comment)>,
or unsubscribe
<https://github.com/notifications/unsubscribe-auth/AKWSMFGXLXRGJKSRINFMVITWVJKZ3ANCNFSM6AAAAAAUD6EM7E>
.
You are receiving this because you were mentioned.Message ID:
***@***.***>
from hpc-stack.
Hang-Lei-NOAA
commented on July 30, 2024
I have updated the installation of hdf5 /1.14.0 with NETCDF/4.9.1 on hera installation.
from hpc-stack.
edwardhartnett
commented on July 30, 2024
@hang does the netcdf-c-4.9.1 suffer the same problems with UFS as 4.9.0? Or are they fixed?
We really shouldn't need 4.9.0 and 4.9.1, everyone should just use 4.9.1. But is that OK with @junwang-noaa ?
from hpc-stack.
Hang-Lei-NOAA
commented on July 30, 2024
@edwardhartnett The previous reported tests on Hera seems fine. But I am working on Acorn to solve a series of associated possible issues with the UFS failure that Pan Li reported. My first fix is to get the esmf 8.4.0 external working, then get the netcdf updated, then to fix the mapl/2.34.0 installation. Then I will repeat Pan LI's UFS tests.
from hpc-stack.
junwang-noaa
commented on July 30, 2024
@hang does the netcdf-c-4.9.1 suffer the same problems with UFS as 4.9.0? Or are they fixed?
We really shouldn't need 4.9.0 and 4.9.1, everyone should just use 4.9.1. But is that OK with @junwang-noaa ?
@edwardhartnett Just to confirm that we are going to use 4.9.1? Also may I ask what is the problem in UFS with 4.9.0? If netcdf 4.9.1 is working with current UFS test, we can update 4.9.1 and start to update the code to get the new features. My understanding is that netcdf 4.9.0 is backward compatible.
from hpc-stack.
Related Issues (20)
- Port to Intel LLVM based compilers
- ncap2 is missing in nco/5.0.6 on jet HOT 2
- nemsio v2.5.4 modulefile needs ./lib64/ default path for NEMSIO_LIB HOT 2
- degrib is not compiling with hpc-stack g2c and png HOT 1
- Request wgrib2/3.0.2_wmo and wgrib2/3.1.1_wmo with intel compiler on Hera
- [INSTALL] MAPL 2.34.0 HOT 21
- [INSTALL] CRTM 2.4.0 on Jet with Intel 18 HOT 7
- [INSTALL] Update the CRTM 2.4.0 fix files on all machines HOT 9
- [INSTALL] Update CRTM-2.4.0 on all HPC machines HOT 14
- hpc-stack on Hercules HOT 19
- nco/5.0.6 and nco/4.9.3 not working as expected HOT 1
- [INSTALL] New python environment for global workflow HOT 1
- [INSTALL] eckit 1.23.0<title> HOT 2
- [INSTALL] SCOTCH v7.0.4 on RDHPCS machines
- Problem with CRTM installation on Orion HOT 2
- missing hpc-stack on Orion
- Missing hpc-stack on Orion after the last maintenance cycle HOT 9
- Netcdff library issue on Hera
- /usr/bin/ld: cannot find -lmpi_mpifh: No such file or directory collect2: error: ld returned 1 exit status make[2]: *** [makefile:35: tracelib_preload] Error 1[INSTALL] <title>
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from hpc-stack.