Comments (5)
I got the same error, and it has been solved by installing matplotlib.
from uxm_deconv.
I had the same error when matplotlib was not installed
But I got an error 'AttributeError: 'DataFrame' object has no attribute 'append'. Did you mean: '_append'?' which was due to pandas version higher then 1.5.3
from uxm_deconv.
I am getting the same error when I try to use plot. Did you find a solution to this?
$ uxm plot output.csv -o output.pdf
Invalid command: plot
did you mean plot?
UXM deconvolution tool, version 0.1.0
Usage: uxm <command> [<args>]
run uxm <command> -h for more information
Optional commands:
deconv
build
plot
heatmap
test
binary
from uxm_deconv.
Strangely, this problem seemed to fix itself as I was trying to troubleshoot it. I am honestly not sure what change resolved the issue, but uxm plot
is now being recognized as a command.
Thank you for your continued work on this and your other great programs.
from uxm_deconv.
Strangely, this problem seemed to fix itself as I was trying to troubleshoot it. I am honestly not sure what change resolved the issue, but
uxm plot
is now being recognized as a command.Thank you for your continued work on this and your other great programs.
How did you solve this problem? I had the same problem. For any command, invalid is displayed. I'm confused. Hope to get your help. Thank you!
from uxm_deconv.
Related Issues (16)
- Deconvolution issues HOT 6
- top markers HOT 2
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- Reference for the both datasets Nature and Med papers (VEC) HOT 1
- Invalid Input Argument error during deconvolution HOT 4
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from uxm_deconv.