FAST outputs refer to non-existing files. about nipype HOT 5 CLOSED

I investigated a little further: Indeed if multi-image segmentation is performed there is one bias/restore output per input. However, multiple image input is ignored unless "-S %d" matching the number of inputs is defined as well. If not, unnumbered bias/restore files are written.

So I guess this interface needs an overhaul. I wanted to do this, but then stumbled across a problem. Since the -S parameter is redundant with the number of inputs, or rather can be derived from it, it doesn't make sense to me to expose it. Is there a way to sneak in an additional parameter that depends on the number of input files?

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I guess _format_arg might be a way to achieve this.

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I have implemented a fix and I'm testing it right now...

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assigned: michael

we'll just use an assigned tag

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Merge remote branch 'hanke/master'

• hanke/master:
  BF: Handle FAST probability map output.
  BF: Handle single and multiple image segmentation output of FAST. Closed by 0dc9b25
  BF: Always include an appropriate -S option for FAST
  BF: Documentation carried wrong method signature

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