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aics-ml-segmentation

AICS ML Segmentation (One-Way) Mirror

bids-examples

A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.

brain-diff

brats17

Patch-based 3D U-Net for brain tumor segmentation

briefbio

carbontracker

Track and predict the energy consumption and carbon footprint of training deep learning models.

codecarbon

Track emissions from Compute and recommend ways to reduce their impact on the environment.

compare-surf-tools

course-materials-2021

Materials for the 2021 NeuroDataScience Course (McGill QLS612)

deepnet

Implementation of some deep learning algorithms.

et_biomarker

The code hub for MNI ET dataset based analysis and projects.

experiment-impact-tracker

fastsurfer

PyTorch implementation of FastSurferCNN

fmriprep

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

french-sentiment-analysis-with-bert

How good is BERT ? Comparing BERT to other state-of-the-art approaches on a French sentiment analysis dataset

hackathon2022

Website for the 2022 OHBM Hackathon

heudiconv

A flexible DICOM converter for organizing brain imaging data into structured directory layouts

intro_git_github

Introduction to git and GitHub

labelbuddy-annotations

Annotations of academic papers. The papers were likely gathered using pubget, and the annotations made with labelbuddy

lsn

Longitudinal Siamese Network for clinical trajectory prediction

magetbrain

main-educational.github.io

website of the educational workshop of the Montreal Artificial Intelligence and Neuroscience (MAIN) conference

mickey

A minimal one-column theme for Jekyll.

micm-summer-scholar-2021

minc-toolkit-containers

Making containers with minc-toolkit

mlsp-challange-2014

MLSP 2014 Schizophrenia Classification Challenge

mr_preproc_dash

dashboard to monitor MR image preproc pipelines

mr_proc_doc

The neurobagel documentation

neurodatascience.github.io

NeuroData Science Lab Website

neuropipelines.github.io