nh3 Goto Github PK
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nh3's Projects
anndata
Annotated data.
bioblend-galaxy-sc-tertiary
bioconda-recipes
Conda recipes for the bioconda channel.
cellsnp-lite
Efficient genotyping bi-allelic SNPs on single cells
celltypecompositionanalysis
chipspikeinnorm
conda
OS-agnostic, system-level binary package manager and ecosystem
container-galaxy-sc-tertiary
Galaxy container for single cell RNA-Seq tertiary analysis tools
cross-sampler
read sampler for ngs data
ctk
emptydrops
Python implementation of emptydrops() in CellRanger v3.0.2
graph-utils
hicpipe
Map and process pair-end C-seq reads
hictools
juicebox
Software for visualizing data from Hi-C and other proximity mapping experiments
multi-package-containers
Testing building mulled containers for multi-requirement tools.
ngs-utils
Common utilities for NGS analysis
r-optparse
R package providing a commandline optional argument parser
sc3
A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
scanpy-scripts
Scripts for using scanpy
scg_lib_structs
Collections of library structure and sequence of popular single cell genomic methods
seurat
R toolkit for single cell genomics
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
template
tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
treecall
Tree-based joint lineage inference and somatic mutation calling
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