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Nikhil Gopal's Projects

23andme icon 23andme

python module to help explore raw data from 23andMe

confusionmatrix.js icon confusionmatrix.js

A small javascript library to create a confusion matrix and calculate values of true positives, true negatives, false positives, false negatives, sensitivity, specificity, positive predictive value, negative predictive value, positive likelihood, negative likelihood, prevalence, false positive rate, false discovery rate, false negative rate, Matthew's coefficient, accuracy, f1 score, informedness, and markedness.

cytoscape.js icon cytoscape.js

Graph theory (a.k.a. network) library for analysis and visualisation (compatible with CommonJS/Node.js/Browserify/Webpack, AMD/Require.js, npm, Bower, jspm, Meteor/Atmosphere, jQuery, and plain JS/JavaScript)

epimodelworkshop icon epimodelworkshop

Code snippets from the EpiModel workshop held at University of Washington 7/9/13-7/13/13

explane icon explane

A mobile application (built with Cordova PhoneGap) that allows users to take a picture of a scientific poster with variant RSIDs on it, extract the RSIDs, and query them against the MyVariant service (http://www.myvariant.info).

grapharis.js icon grapharis.js

A set of scripts used to interact, model, and visualize graph and network structures

hedgefunddata icon hedgefunddata

A set of scripts to parse SEC filing data for specific hedge funds

kaggleclass icon kaggleclass

Sharing code with group members in Kaggle-based class

ojs icon ojs

Open Journal Systems

oncoscape icon oncoscape

a web application to apply/develop analysis tools for Molecular and Clinical data

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