Comments (4)
@baimianer There is no way to do this currently. The table is for web only. But after CLI run you have alignment fasta and TSV outputs which contain the same information and even more. You can analyze these files further and render the information any way you like. A simple way - you can open TSV output in Excel, Google Sheets or any other spreadsheet.
P.S. Not sure what Auspice has to do with it. You probably meant Nextclade.
from nextclade.
For example, by using auspice cli version , I can view the tree on the browser. So I want to know if there are any tools that can display the result table? The results nextclade web presents are very perfect.
from nextclade.
So I want to know if there are any tools that can display the result table?
Nope
from nextclade.
Thank you for your answer
from nextclade.
Related Issues (20)
- docs: document nextalign-like use-case HOT 1
- ENH(nextclade cli): nextclade dataset list: indicate whether clades can be assigned HOT 7
- nextclade run --output-columns-selection throws error for seqName and includes index even though I don't want index HOT 11
- Nextclade Web: Confusing unwanted dataset switching HOT 3
- Nextclade Web: consider rethinking dataset badges HOT 1
- Nextclade Web: don't store unnecessary dataset info in local storage
- [minor] Auspice dataset functionality: URL redirects don't update displayed metadata HOT 3
- Max marker setting even counts markers that are off
- Frameshift and insertion markers cannot be disabled/configured in contrast to all other markers
- Unfolding <details> in changelog in website jumbles things up
- Rename `master` to `main`
- How does one update Nextclade CLI? I cannot find any instructions on the Nextclade CLI page, only descriptions of various updates? HOT 1
- Bioconda workflow failed with push error due to insufficient permissions HOT 7
- SVG download for the Results table
- Default threads for webapp are set too high HOT 2
- Add coverage per CDS to output HOT 8
- List of mutational changes per clade HOT 2
- Can influenza H5 datasets be available for nextclade CLI HOT 3
- Can't do quality control when change reference HOT 1
- Nucleotide insertions not shown in peptide tooltip, causing confusion in case of frameshift due to nt insertion HOT 6
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from nextclade.