Related Issues (20)
- Unhandled exception when renewing login from a different Cognito user pool HOT 1
- Pass AWS credentials from standard file to Docker HOT 1
- Show progress during `check-setup` HOT 1
- Unable to set up Singularity runtime on Fred Hutch's `rhino` HOT 2
- shell: Command hangs when `--conda` is used and the runtime has not been set up HOT 13
- Update pinned version of micromamba (1.1.0 -> 1.5.8) as it's been 9 months since last bump
- Update "build directory" terminology in help and docs HOT 1
- Scheduled CI failed across macOS due to IQTree error: `Invalid "-ntmax" option` HOT 2
- aws-batch: support Snakemake `--report` HOT 7
- Scheduled CI hanging on `macos-11` job
- CI failing: unable to pull `hello-world:latest` HOT 1
- Why did the tarball filename change from nextstrain-cli-VERSION.tar.gz to nextstrain_cli-VERSION.tar.gz from 8.2.0 to 8.3.0 HOT 1
- `nextstrain remote download` produces bad local filenames when periods are in the dataset name HOT 2
- CI on macOS failing due to IQTREE HOT 11
- Error during `nextstrain build` after `nextstrain update conda`
- Pyoxidizer currently unmaintained HOT 2
- CI: deprecation warning for node 16 use in setup-miniconda v2 HOT 2
- Fix broken links in docs
- aws-batch logs delayed HOT 1
- Communicate why an upload action was not allowed HOT 1
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