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Pierre Marijon's Projects

badread icon badread

a long read simulator that can imitate many types of read problems

bandage icon bandage

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

bbhash icon bbhash

Bloom-filter based minimal perfect hash function library

better_rev_comp icon better_rev_comp

Project to detreminate what's the better solution in time of revcomp

bioconvert icon bioconvert

Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

biommap icon biommap

A vcf parser that use memory mapping to get high performance.

biotest icon biotest

Generate random test data for bioinformatics

br icon br

Brutal Rewrite a long read corrector

canu icon canu

A single molecule sequence assembler for genomes large and small.

compress_stream icon compress_stream

Header only c++ library for read and write compress file with std like stream

cutevcf icon cutevcf

simple viewer for variant call format using htslib

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