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Comments (3)

vladsavelyev avatar vladsavelyev commented on June 10, 2024 1

Ah, I managed to reproduce! Fixed with #2536 Sorry about this issue. A bit tricky with determining sample names in fastp outputs.

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IdoBar avatar IdoBar commented on June 10, 2024 1

Thanks @vladsavelyev !
It seems that it was able to parse the correct sample name from the filenames according to this:

Falling back to extracting it from the file name: "AR0721.fastp.json" -> "AR0721 | AR0721"

But for some reason it generated an error instead of going ahead with it.

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vladsavelyev avatar vladsavelyev commented on June 10, 2024

Would you be able to share multiqc inputs / fastp outputs to reproduce the error on our side?

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