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benchmark-models

A collection of ODE models with experimental data as benchmark problems in order to evaluate new and existing methodologies for data-based modelling

bionlp2021

deepcuratestuff

docimg2mmax

fairdom.github.io

The FAIRDOM website

libpetab-python

Python package for working with PEtab files

mmax2

Official repo of the MMAX2 annotation tool

pymmax2

Source code for pyMMAX2, a Python API for MMAX2

rdm-toolkit

ELIXIR Data Management Toolkit

rightfield

RightField is an open-source tool for adding ontology term selection to Excel spreadsheets. RightField is used by a 'Template Creator' to create semantically aware Excel spreadsheet templates. The Excel templates are then reused by Scientists to collect and annotate their data; without any need to understand, or even be aware of, RightField or the ontologies used. Later, the information selected or completed by the Scientist can be extracted from the spreadsheet along with all term or ontology information, or as RDF

seek

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

table-validator

Use tables with validation schemata to validate other tables.

webextensions-examples

Example Firefox add-ons created using the WebExtensions API

welt

A cost-sensitive BERT that handles the class imbalance for the task of biomedical NER.