Comments (6)
ashindeed
commented on June 17, 2024
1
I used bbduk.sh instead and then started ervamp from after the trimming step
Could you please send an example of how to do it? Many thanks
I have the same problem. Do you have any suggestion to solve this problem? Thanks
Hi
Just to let you know, I ended up changing btrim64 to btrim and script seems to work fine
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jianguozhouzunyimedicaluniversity
commented on June 17, 2024
Did you solve this problem?
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EmanuelSoda
commented on June 17, 2024
I have the same problem. Do you have any suggestion to solve this problem?
Thanks
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rkabiljo
commented on June 17, 2024
I used bbduk.sh instead and then started ervamp from after the trimming step
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jianguozhouzunyimedicaluniversity
commented on June 17, 2024
I used bbduk.sh instead and then started ervamp from after the trimming step
finally, it's worked？
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EmanuelSoda
commented on June 17, 2024
I used bbduk.sh instead and then started ervamp from after the trimming step
Could you please send an example of how to do it? Many thanks
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Related Issues (11)
- installation / usage instructions HOT 17
- Differential analysis HOT 2
- ERV normalisation questions
- Question about ERV family in ERVmap.bed file
- How was ERVmap.bed generated? HOT 1
- out of order record
- results fileter HOT 5
- Failed to run the jobs
- ERVresults.txt didn't detect any ERVmap HOT 13
- /usr/bin/python2.7 htseq.script.count not found HOT 1
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