Comments (1)
Hi @Bio-LiHe
You likely have already found this out but that command has been deprecated. It is now included in the prepare_detergent()
function.
I am currently testing the workflow but based on the output detergent.rds
file, it appears the germline event inference has correctly taken place.
Hope this helps but the authors may have more to say on the matter.
Best,
Patrick
from dryclean.
Related Issues (8)
- Typo in tutorial HOT 1
- na.omit wiping out data.table HOT 8
- Error in readRDS(germline.filter) : bad 'file' argument HOT 1
- apply dryclean to other ASCN algoritms HOT 2
- "Error in m.vec - s : non-conformable arrays" when running the tutorial HOT 3
- prepare_detergent failing when using all samples HOT 2
- Issue with pon.binsize HOT 6
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from dryclean.