Name: Matthijs Berends
Type: User
Company: University Medical Center Groningen
Bio: Medical epidemiologist/microbiologist at University Medical Center Groningen and head of @certe-medical-epidemiology
Twitter: msberends
Location: Northern Netherlands
Blog: https://git.io/PhDthesisAMR
Matthijs Berends's Projects
This is my full PhD thesis in R Markdown (using the bookdown package), containing a PDF and EPUB file, and a website in the ‘docs’ folder with the integral content of the book. The shortened URL is git.io/PhDthesisAMR.
Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi.org/10.18637/jss.v104.i03.
Source code of the book: "Antimicrobial Resistance Data Analysis With R"
Quickly place relevant badges at the top of your readme, stop copy pasting, start on your project
Authoring Books and Technical Documents with R Markdown
caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models
Source universe for: certe-medical-epidemiology
Fast and Easy Data Cleaning (in R)
Fast and Easy Data Cleaning (in R)
Status badges to inform a pod's latest version and platform released on Cocoapods!
Dplyr: A grammar of data manipulation
Website for blogging build in Jekyll using the so-simple theme
Extension for Thunderbird providing email and contact accounts using Exchange Web Services
Gallery of ggplot2 extensions
Simple Shiny app to encrypt data for safe, anonymised data transfer
A thTheme and RStudio theme from Sublime Text 3
An R package containing data sets with up to date microbial taxonomy
R SDK for interacting with Microsoft 365 APIs
R Package For Nelson's Quality Control Rules
Experience macOS just like before
This is a simple repo with info for my (new) PhD students.
Format columns with colour
Generate static html documentation for an R package
Just a little test repo
A copy of dplyr verbs using only base R