Cannot plot winner genome plots about drep HOT 3 CLOSED

Hi @yqy6611 -

Yes, those plots can get buggy. Just FYI, the rest of the program still works even when those plots fail.

If you run the program in debug mode (with -d), more output will be created to explain why the plots aren't working.

Best,
Matt

from drep.

Hi all,

I ran into the same issues while running a dereplication job.

I don't know if it help, but here are the error messages :

Failed to make plot #5: list index out of range
Traceback (most recent call last):
File "/home/guest-biom/miniconda3/envs/dRep/lib/python3.12/site-packages/drep/d_analyze.py", line 108, in d_analyze_wrapper
plot_binscoring_from_wd(wd, plot_dir, **kwargs)
File "/home/guest-biom/miniconda3/envs/dRep/lib/python3.12/site-packages/drep/d_analyze.py", line 369, in plot_binscoring_from_wd
plot_winner_scoring_complex(Wdb, Sdb, Cdb, Gdb, plot_dir = plot_dir, **kwargs)
File "/home/guest-biom/miniconda3/envs/dRep/lib/python3.12/site-packages/drep/d_analyze.py", line 734, in plot_winner_scoring_complex
g.annotate("{0:.1f}".format(vals[i]), (p.get_width(), p.get_y()+(p.get_height()/1.1) ), fontsize=8)
~~~~^^^
IndexError: list index out of range
Plotting winning genomes plot...
Failed to make plot #6: list index out of range
Traceback (most recent call last):
File "/home/guest-biom/miniconda3/envs/dRep/lib/python3.12/site-packages/drep/d_analyze.py", line 117, in d_analyze_wrapper
plot_winners_from_wd(wd, plot_dir, **kwargs)
File "/home/guest-biom/miniconda3/envs/dRep/lib/python3.12/site-packages/drep/d_analyze.py", line 403, in plot_winners_from_wd
plot_winners(Wdb, Gdb, Wndb, Wmdb, Widb, plot_dir = plot_dir, **kwargs)
File "/home/guest-biom/miniconda3/envs/dRep/lib/python3.12/site-packages/drep/d_analyze.py", line 840, in plot_winners
_make_scoring_plot(d,bars,**kwargs)
File "/home/guest-biom/miniconda3/envs/dRep/lib/python3.12/site-packages/drep/d_analyze.py", line 1384, in _make_scoring_plot
g.annotate("{0:.1f}".format(vals[i]), (p.get_width(), p.get_y()+(p.get_height()/1.1) ), fontsize=8)

from drep.

Fixed in version 3.5.0

from drep.