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Matt's Projects

bio-nexml icon bio-nexml

BioRuby plugin to read and write NeXML data

biogems.info icon biogems.info

Tools for keeping track of biogems through http://biogems.info/

biosql icon biosql

The BioSQL database schema and associated scripts.

cgq icon cgq

computing genonmic quality

csl-ruby icon csl-ruby

Citation Style Language (CSL) API for Ruby

curriculum icon curriculum

Biodiversity Informatics Curriculum Interest Group

dbf icon dbf

DBF is a small fast Ruby library for reading dBase, xBase, Clipper and FoxPro database files

dwc_agent icon dwc_agent

Ruby gem to cleanse Darwin Core terms containing people names prior to passing to its dependent parser.

gbifrb icon gbifrb

GBIF Ruby client; docs: http://www.rubydoc.info/gems/gbifrb/0.1.0

generator icon generator

ROR app to combine DNA sequence data from multiple FASTA files for phylogenetic inference.

gnfinder icon gnfinder

Ruby gem to access functionality of ``gnfinder`` project written in Go

htindex icon htindex

creates an index of scientific names in HathiTrust

jmatrixbrowse icon jmatrixbrowse

jQuery plugin for browsing large matrices using dragging (like Google Maps)

jowl icon jowl

Jruby experiments with owlapi

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