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azure-quickstart-templates

Azure Quickstart Templates

bwa

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

causal-conv1d

Causal depthwise conv1d in CUDA, with a PyTorch interface

chronozoom

ChronoZoom is an interactive timeline for all of history.

codalab

CodaLab Project

complete-striped-smith-waterman-library

darwin

Darwin: A co-processor for long read alignment

dragmap

DRAGEN open-source mapper

finufft

Non-uniform fast Fourier transform library of types 1,2,3 in dimensions 1,2,3

gadgetron

Gadgetron - Medical Image Reconstruction Framework

gatk

Official code repository for GATK versions 4 and up

helmetcam

Reference Windows 8 and Windows Phone 8 apps that use Camera Remote API by Sony to connect and control cameras wirelessly

ksw2

Global alignment and alignment extension

mamba

mamba-minimal

Simple, minimal implementation of the Mamba SSM in one file of PyTorch.

mgl

Microsoft Genomics Library contains highly optimized compute cores for genomics applications

minimizer_generation_test

AVX2 minimizer generation sample

nthash

ntHash: recursive nucleotide hashing

onnxruntime

ONNX Runtime: cross-platform, high performance ML inferencing and training accelerator

pcg-cpp

PCG — C++ Implementation

qsharp-runtime

Runtime components for Q#

tbb

Official Intel(R) Threading Building Blocks (Intel TBB) GitHub repository.

wdl-ide

Rich IDE support for Workflow Description Language

zfp

Compressed numerical arrays that support high-speed random access