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bluepyopt

Blue Brain Python Optimisation Library

datajoint-docs

DataJoint Documentation

datajoint-python

Relational data pipelines for the science lab

datajoint-tutorials

Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples

db-programming-with-datajoint

A series of notebooks accompanying video tutorials

deeplabcut

Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans

element-array-ephys

DataJoint Element for Neuropixels analysis with Kilosort

element-calcium-imaging

DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT

element-deeplabcut

DataJoint Element for behavioral analysis with DeepLabCut

element-electrode-localization

DataJoint Element for localizing Neuropixels electrodes

element-facemap

DataJoint Element for behavioral analysis with Facemap

element-miniscope

DataJoint Element for miniscope calcium imaging analysis with CaImAn

element-moseq_v2

DataJoint Element for Motion Sequencing with Keypoint-MoSeq

keypoint-moseq

microns_phase3_nda

nda schema for MICrONS phase3

moseq2-app

MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.

multimodal-optimization-for-fitting-cerebellar-grcs

Source code, results and analysis of the resulting population of neurons from the article 'On the use of a multimodal optimizer for fitting neuron models. Application to the cerebellar granule cell. (2021) Front. in Neuroinf.

workflow-deeplabcut

Example DataJoint workflow for behavioral analysis with DeepLabCut