mikorabago Goto Github PK

albinotonnina.com

source-code

awesome-cancer-variant-databases

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

basic-bioinformatics-bioinformatics-1-bio-4312d

A repository containing all the file projects that I have for the Basic Bioinformatics (Bioinformatics 1) (BIO 4312d) course.

bio-1311-introduction-to-biology

A repository containing all the file projects that I have for the BIO 1311: Introduction to Biology course.

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics-2-comp-4312a

A repository containing all the file projects that I have for the Bioinformatics 2 (COMP 4312a) course.

bioinformatics-3-comp-4312b

A repository containing all the file projects that I have for the Bioinformatics 3 (COMP 4312b) course.

bioinformatics-4-comp-4312c

A repository containing all the file projects that I have for the Bioinformatics 4 (COMP 4312c) course.

bioinformatics-5-comp-4312d

A repository containing all the file projects that I have for the Bioinformatics 5 (COMP 4312d) course.

bioinformatics-6-comp-4312e-

A repository containing all the file projects that I have for the Bioinformatics 6 (COMP 4312e) course.

breast_cancer_classifier

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening

cbioportal

cBioPortal for Cancer Genomics

claude

The CLAuDE model

computational-molecular-medicine-course-project

Machine Learning model to predict lymph-node metastasis

cos.io

dockstring

A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.

hello-world

My Hello World project.

moalmanac

Molecular Oncology Almanac, a clinical interpretation algorithm paired with a novel underlying knowledge base for precision cancer medicine

moalmanac-paper

Analyses related to Reardon et al. 2020, Clinical interpretation of integrative molecular profiles to guide precision cancer medicine

ncrf

Cancer metastasis detection with neural conditional random field (NCRF)

personalized-medicine-redefining-cancer-treatment

Personalized-Medicine-Redefining-Cancer-Treatment is a problem of classifying the given genetic mutations based on the literature available in the medical domain into one of the given 9 classes. In reality, The molecular pathologist searches for evidence in the medical literature that is relevant to the given genetic variations. Finally, this molecular pathologist spends a huge amount of time analyzing the evidence related to each of the variations to classify them. The goal of this case study is to replace the last step with a machine learning model.

plip

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Salentin et al. (2015), https://www.doi.org/10.1093/nar/gkv315

researchkit

ResearchKit is an open source software framework that makes it easy to create apps for medical research or for other research projects.

superfolder-covid-mrna-vaccines

SuperFolder COVID mRNA vaccines, stabilized for in vitro storage and shipping

whose-gene-is-it-anyway

zelda

Files for the Zelda in python tutorial