Name: Michael Siniscalchi
Type: User
Company: Princeton Neuroscience Institute
Bio: Postdoctoral Research Associate in Ilana Witten's lab at Princeton Neuroscience Institute. @BrainCOGS Former PhD student in Alex Kwan's lab at Yale. @Kwan-Lab
Location: Princeton, NJ
Michael Siniscalchi's Projects
Relational data pipelines for the science lab
General code for file management, figure generation, etc
Recursive motion correction for 2-photon imaging data, using one or two color channels. Based on NoRMCorre by flatironinstitute (https://github.com/flatironinstitute/NoRMCorre).
Code for pre-processing 2-photon imaging data.
Works-in-progress and tools for doctoral thesis research
Macro for iterative movement correction of calcium imaging data in ImageJ. Based on moco from the Yuste Lab (Columbia).
MATLAB code for analysis of flexible sensorimotor behavior and simultaneous 2-photon imaging data.
Code for analyzing mouse behavior and longitudinal 2-photon brain imaging data collected during the learning of a two-choice auditory discrimination task.