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circular-string

This was a project for my bioinformatics class. We studied the circular string problem and its application to bioinformatics and sequence generation / reconstruction. This project solves the circular string problem taking in an integer k, by creating a DeBruijn graph and generating a Euler cycle from it (the edges corresponding to all possible binary k-mers).

dna-motif-search

This was a project for my bioinformatics class. We studied a couple of motif finding algorithms for finding a potential motif in n many randomly generated DNA sequences. This project 1) randomly generates n many DNA sequences 2) randomly generates a kmer 3) edits up to d many positions in that kmer & inserts that kmer (now motif) into each sequence From here, 4) blindly reads these sequences (with emplaced motifs) and 5) brute force searches all n sequences to find n many motifs with the lowest hamming distance from a consensus string 6) Utilizes Gibbs Sampling algorithm (a randomized algorithm) to find the lowest overall hamming distance from a motif profile Implemented in Swift.

dna-pairwise-alignment

This was a project for my bioinformatics class. We studied a dynamic programming algorithm (& backtracking) for finding the most optimum pairwise alignment between two DNA sequences. This is that algorithm and backtracking to find one & then all the optimum alignments of two sequences (accepted in .fasta format). Implemented in swift.

galaga

Utilizing Processing interface/language, a recreation of the classic arcade game. Indending to optimize for web utilizing the .pde to .js functionality

gamejam

iterm2-color-schemes

Over 200 terminal color schemes/themes for iTerm/iTerm2. Includes ports to Terminal, Konsole, PuTTY, Xresources, XRDB, Remina, Termite, XFCE, Tilda, FreeBSD VT, Terminator, Kitty, MobaXterm, LXTerminal, compatible with Microsoft's terminal

lineeditor

A line editor implemented using a linked list structure, has the functionality of inserting lines at any point, and deleting, searching, and editing lines. A Data Structures Class Project

madi

personal resume website, using React & SASS, published through github pages

mfileman

minihack

at ult!

morseexpress

Morse keyboard compatible with iMessage- not only for communication, but also for expression!

orange

studytimer

In the process of learning Swift, I made a basic timer app

swamphacks2019