Comments (2)
At least on the print
side I think I have all of those fixed now.
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It's possible that there are a few remnant try
/except
issues, I didn't look for them.
from snakepipes.
Related Issues (20)
- request for post DNA-mapping pipelines feature HOT 3
- createIndices error on cluster (sorry for spaming!) HOT 3
- genome.fa from URL HOT 1
- Temporary directory HOT 1
- WGBS: unrecognized reference name ""; treated as unmapped HOT 14
- WGBS produceReport: Error in `read.bismark()` HOT 4
- snakePipes installation fails with python 3.12.0 HOT 1
- WGBS QC Report: wrong mapping rate and PCR duplication rate HOT 2
- Error in rule Bowtie2 HOT 6
- memory for plotCorr_bed_spearman HOT 3
- error in chip-seq using Genrich as mapper HOT 21
- CSAW pipeline HOT 4
- ChIP-seq CSAW group
- [Question] bam Coverage bw files clarification HOT 2
- in chip-seq paired mode is not used for MACS2 HOT 4
- MACS2 not using proper effective genome size HOT 4
- [request] implemantation of SEACR
- spikeIn sampe scaling factor calculation discrepenses HOT 2
- createIndices error HOT 1
- make splitSampleSheet more flexible and include any column between name and condition
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