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2023retos

here is a place for my code for the course

3--end-processing

a2a-fair-metrics

a collection of metrics designed at the Apples to Apples hackathon

acb_tfm

A repository to keep my TFM's code

accelerated_intro_wilkinsonexams

Exam Questions and instructions for the Accellerated Introduction to Computational Biology M.Sc. course - Wilkinson Section

activerecord_sinatra_tutorial

A record of what I did to create a basic Sinatra setup with ActiveRecord and using corneal to create the MVC skeleton. May or may not be useful for anyone else...

babel

Web service for translating between different information representations

bh23-odrl

Tools to create, visualize, and negotiate over ODRL digital rights policies

bio2rdf2sadi

Code for auto-wrapping the Bio2RDF Endpoints as SADI services (both Perl and Java steps included)

biocertainty

biohackathon-projects-2020

This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage projects, publish materials, create code, etc.

bioinformaticsretos-1-4

First four lectures for the Bioinformatics Programming Challenges course

bioinformaticsretos-5-8

Lectures 5 to 8 of the Bioinformatics Challenges course

biolinkml_ruby

Ruby libraries for working with biolinkml meta-schema

bioruby

bioruby

blockchain

blockchain (crypto) tools, libraries & scripts in ruby

cde-in-box

This repository contains software to create and deploy CDEs

comunica

📬 A knowledge graph querying framework for JavaScript

covid-19-bh20

COVID-19 Biohackathon April 5-11 2020

cropmapper

Using EarthCast API to determine what crops are planted, when, and where

csv2rdf4lod-automation

Shell script automation to support csv2rdf4lod converter

datafairport

dataverse-docker

Dataverse 5.11.1 on Docker is an "Archive in a box" package which could be used both as demo and production system and easily integrated with other services.

docker-hitch

Official Docker image for Varnish's Hitch TLS proxy

docker-stacks

Ready-to-run Docker images containing IRuby Notebook applications

duc-cce

Digital Use Conditions and Common Conditions of Use Elements - various tools, examples and mappings to DCAT and ODRL

duchenne-daru

Using daru-view to visualize the shallot data from Duchenne registries

duchenne-pros

The ontology for the DPP PROs questions

ejp-mapping-test

a place to play with linkml mappings for EJP

ejp-pht-runner

My attempt to create a "personal health train" style docker image that coordinates other images inside of a "station"