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attenuating_neural_threat_expression_with_imagination_2018

data to accompany neuron publication Attenuating neural threat expression with imagination (2018)

bash-tools

some tools in ba$h to reorganize stuff

bodymapitem_online

JS scripts for displaying body map items

emonet_gazecheck

response to reviewer on emoNET pub to check if participants are looking at the images

imagined_extinction_public_data_and_code

data and analysis scripts to reproduce final figures in Reddan, Wager, Schiller (under review) Attenuating Fear Using Imagination. Please contact me before using these data. Thanks!

jama_effectsize_sims

simulation scripts from bias in neuroimaging effect sizes JAMA paper

masc_code

paradigm files for MASC boulder-stanford collaboration study

masc_qc

data quality control reports for MASC progress report 2019

mrn_to_canlab

Tools to take multiband imaging data processed by MRN and put it into our CANLab format. It also runs some data quality tools and prepares your nuisance regressors by making spm-friendly noise_model1.mat for each run that include 24 motion regressors and spike indicators.

mvpa_cuny_workshop_2024

intro to MVPA w/ SVM for fMRI (using wani woo's data)

neuroimaging_tools

random tools i write *not* in matlab to aid in neuroimaging analysis i will do in matlab

neurolime

applying LIME to neuroimaging data

ptb_experiments

MATLAB code for behavioral and fMRI experiments using PsychToolBox functions. These take TTL and user input and communicate with physiological recording hardware. Some are well commented as a learning tool.

simulations

svm_neuroimaging_workshop_2022