marcoralab Goto Github PK
Name: marcoralab
Type: Organization
Name: marcoralab
Type: Organization
Pipeline to run unsupervised ADMIXTURE with a gnomAD reference
Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The name of the connection can be used to reestablish the connection later or to terminate it.
Docker for Ruth HWE
Snakemake workflow for GATK SNP and INDEL variant calling on mitochondria DNA
Post imputation QC and processing of Michigan Imputation Server Jobs
A Snakemake pipeline to prepare binary PLINK files for the Michigan Imputation Server.
Guides, scripts and config files for everyday operations, onboarding and offboarding
Common scripts for the Goate and Marcora labs
An example Rmd with a looping included sub-document
Snakemake profile for running jobs on an LSF cluster
Causal Association of TNF on AD
Investigating the causal relationship between exposures and Alzheimer's endophenotypes
Create Molecular Signatures Database (MSigDB) GMT files for Gene Set Enrichment Analysis (GSEA) using Ensembl gene IDs
Post imputation QC and processing of Michigan Imputation Server Jobs
An integrated pipeline to do initial genotype QC, impute by ancestry, combine results and do remaining QC on microarray genotypes
RAREMETAL pipeline
Pipeline to phase genotypes using ShapeIt5
Primer on differences between Snakemake 7 and 8 for Mount Sinai
Pipeline for lifting over vcf files and filesets
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.