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Marco D Visser

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I am an Assistant Professor in the Institute of Environmental Sciences at Leiden University. I am broadly interested in forests and the role they play in the earth system. My research interests include community, population, and biophysical modeling. More specifically, I aim to merge big data with big theory, applying physics-aware machine learning to study the health and future of tropical forests. I am a proponent of open and reproducible science, which is why I publish most of my code here, and develop open-source R-packages for high performance computing (aprof), autotomated tracking and computer vision (trackdem) and radiative transfer modelling (ccrtm).

Published Open-source Projects

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Marco D Visser's Projects

allemacs icon allemacs

Emacs customization for programming with multiple languages (Xtml, S family, C)

allodb icon allodb

An R package for biomass estimation at extratropical forest plots.

aprof icon aprof

Amdahl's profiler, directed optimization.

ascii-telnet-server icon ascii-telnet-server

Can stream an ~20 minutes ASCII movie via Telnet emulation as stand alone server or via xinetd daemon. Using famous ASCII art animation from www.asciimation.co.nz (Star ASCIIMATION Wars)

askr icon askr

Ask R all those important life decisions

bst icon bst

BibTeX style files for ecology journals

ccrtm icon ccrtm

Coupled Chain Radiative Transfer Models

cforr icon cforr

A collection of C/C++ code for use in R

cv icon cv

My personal curriculum vitae in various open-source formats.

data icon data

A collection of public data sets

ddmdd icon ddmdd

Distorted-distance models for directional dispersal

decktape icon decktape

PDF exporter for HTML presentation frameworks

dmcmc icon dmcmc

Markov chain Monti Carlo diagnostics dMCMC

eswp icon eswp

Establishing a scientific writing practice

fdptools icon fdptools

Tools for working with forest dynamics plot data

gpubootcamp icon gpubootcamp

This repository consists for gpu bootcamp material for HPC and AI

graid icon graid

Custom functions for publication grade graphics in R

hyde icon hyde

A brazen two-column theme for Jekyll.

i3 icon i3

my i3 WM configuration

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