Comments (1)
actually k=71 worked only in the sense that it did not crash. Results are irrelevant
unique 0 (exactly one instance of the kmer is in the input)
distinct 1458 (non-redundant kmer sequences in the input)
present 33707750420 (...)
k=63 provided reasonable results
from meryl.
Related Issues (20)
- database file parameters used in count output are too large
- Homopolymer compression is not applied if the first read file is empty HOT 1
- compile problem HOT 2
- How to cite meryl? HOT 4
- meryl terminates with 'std::bad_alloc' and failed assertion HOT 3
- [Compile] ‘gettimeofday’ was not declared in this scope HOT 1
- bitArray-v1.H:86 problem when running the pipeline HOT 1
- Compile error HOT 2
- feature request: filter reads with kmers from bam file? HOT 5
- the parental specific kmers were intersected in progeny genome HOT 2
- How do you plot? HOT 3
- version question about meryl HOT 1
- Conda version issues
- How to install meryl2? HOT 1
- API docs HOT 1
- Use sequence to query meryl db HOT 1
- Is this output correct? HOT 2
- Run Meryl on multiple fastq files HOT 2
- How to get kmer count in query fastq files with kmer database HOT 2
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from meryl.