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ME Martinez's Projects

beeplantite icon beeplantite

Methods from the article Floral visitors in urban gardens and natural areas: diversity and interaction networks in a neotropical urban landscape

boolnet-perturb icon boolnet-perturb

Robustness and Plasticity in Regulatory Networks. The BoolNetPerturb package adds functions to BoolNet for perturbing Boolean Regulatory Networks. This functions can be used for the study of biological systems. This package is capable of labeling states, simulating multiple knock-outs and over-expressions and simulating fixed and transient perturbations in the states and trajectory of a network. See the Jupyter Tutorials for more examples.

boolnet-perturb-0.1 icon boolnet-perturb-0.1

Robustness and Plasticity in Regulatory Networks. The BoolNetPerturb package adds functions to BoolNet for perturbing Boolean Regulatory Networks. This functions can be used for the study of biological systems. This package is capable of labeling states, simulating multiple knock-outs and over-expressions and simulating fixed and transient perturbations in the states and trajectory of a network. See the Jupyter Tutorials for more examples.

cursopandas2020 icon cursopandas2020

Curso de pandas usando datos abiertos de carpetas de investigación de la CdMx

cursotexto icon cursotexto

Tutoria de limpieza y análisis de datos usando tres estrategias: comparación de strings, estandarizar con catálogo(fuzzywuzzy) y stemming (NLTK + snowball).

datatonesycursos icon datatonesycursos

Jupyter notebooks, scripts y otros documentos generados durante datatones y cursos

publiton2019 icon publiton2019

Análisis de red de contratos gubernamentales realizado para el Publiton 2019 CDMX

regnet icon regnet

Python library for analyzing dynamic boolean networks.

rgriffin icon rgriffin

The rGriffin package is an R connector to Griffin. Gene Regulatory Interaction Formulator For Inquiring Networks (griffin) is a java library for inference and analysis of Boolean Network models. Griffin takes as inputs biologically meaningful constraints and turns them into a symbolic representation. Using a SAT engine, griffin explores the Boolean Network search space, finding all satisfying assignments that are compatible with the specified constraints. The rgriffin package includes a number of functions to interact with the BoolNet package. See the Jupyter Tutorials for more examples.

wibblywobbly icon wibblywobbly

Python library to create equivalence dictionaries between a set of texts and a catalog using FuzzyWuzzy.

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