Comments (1)
Regarding the last point (parallelization), a new package called UM-Bridge has been released that creates a bridge between numerical forward models (like ours) to pymc
. It enables the use of pymc
on computing clusters. This type of bridge might be the key to complete separating forward modeling (what HoloPy does) from sampling (what pymc
and other packages do).
Documentation: https://um-bridge-benchmarks.readthedocs.io/en/docs/
Use in HPC/slurm: https://um-bridge-benchmarks.readthedocs.io/en/docs/umbridge/hpc.html
Example of use with pymc
: https://um-bridge-benchmarks.readthedocs.io/en/docs/umbridge/clients.html#pymc-client
Announcement on pymc
discourse: https://discourse.pymc.io/t/new-pymcon-talk-enabling-uncertainty-quantification-by-anne-reinarz-linus-seelinger/13583
from holopy.
Related Issues (20)
- Problem running "Simple Example Scattering Calculations" ValueError: conflicting MultiIndex level HOT 3
- DDA Memory Error HOT 1
- Problems about Scattering Calculations for large distance HOT 4
- Background Grayscale changes HOT 1
- The center of the particle is brighter than the surroundings HOT 1
- Adding a new scattering theory HOT 1
- 3D plotting HOT 1
- Installation HOT 3
- Migrate from Travis CI to GitHub Actions
- Migrate from nose to pytest HOT 1
- Migrate from numpy.distutils to meson HOT 1
- Make maintenance release (3.6)
- Make final release of v3 API (HoloPy 3.7)
- Calculation of noise_sd should be revised
- Test failing for constructive solid geometry with ADDA 1.4
- Processing and simulation methods for iSCAT data
- Tests failing from run_tests.py HOT 2
- trouble installing the ADDA package HOT 2
- Issue with ps_propagate function
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