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Mike's Projects

pubmed icon pubmed

WWW::Search::PubMed perl module.

pure icon pure

A set of small, responsive CSS modules that you can use in every web project.

pyscaf icon pyscaf

Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.

react-fluid-svg icon react-fluid-svg

React component wrapper for rendering cross-browser fluid svg images

react-svg icon react-svg

:art: A React component that injects SVG into the DOM.

recharts icon recharts

Redefined chart library built with React and D3

redis icon redis

Redis is an in-memory database that persists on disk. The data model is key-value, but many different kind of values are supported: Strings, Lists, Sets, Sorted Sets, Hashes

redundans icon redundans

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

respond icon respond

A fast & lightweight polyfill for min/max-width CSS3 Media Queries (for IE 6-8, and more)

rosettafold icon rosettafold

This package contains deep learning models and related scripts for RoseTTAFold

rowgrid.js icon rowgrid.js

A small, lightweight jQuery plugin for placing items in straight rows – Demo:

samtools icon samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

scallop icon scallop

Scallop is a reference-based transcriptome assembler for RNA-seq

selectpage icon selectpage

A simple style and powerful selection jQuery plugin, including ajax remote data, autocomplete, pagination, tags, i18n, keyboard navigation functions

seqtk icon seqtk

Toolkit for processing sequences in FASTA/Q formats

sspace_basic icon sspace_basic

SSPACE Basic, SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension

sspace_longread icon sspace_longread

The modified version of sspac_longread.pl, add compatibility with blasr5.x

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