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alphafold

Open source code for AlphaFold.

anndatar

AnnData interoperability in R

aucell

AUCell: score single cells with gene regulatory networks

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bigquery-jslibs

A collection of JS libraries available to be used from BigQuery

biomart

R package providing query functionality to BioMart instances like Ensembl

biovinci

bitcoin

Bitcoin Core integration/staging tree

bpcells

Scaling Single Cell Analysis to Millions of Cells

bruteforce-database

Bruteforce database

bseqsc

Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline

card

cartodb

Location Intelligence & Data Visualization tool

catfs

Cache AnyThing filesystem written in Rust

ccql

Multi server MySQL client

cellchat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

cellchatv2

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

celltrek

charts

Public helm charts

chromvarmotifs

R package with motifs for use with chromVAR

chronograph

A reactive state management system with novel and unique properties

clickhouse

ClickHouse® is a free analytics DBMS for big data

complexheatmap

Make Complex Heatmaps

conda-pack

Package conda environments for redistribution

cssam

Cell type-Specific Statistical Analysis of Microarray

cxxopts

Lightweight C++ command line option parser

danfojs

Danfo.js is an open source, JavaScript library providing high performance, intuitive, and easy to use data structures for manipulating and processing structured data.

deseq2

Differential expression of RNA-seq data using the Negative Binomial

docs

CellGen IT documentation

elasticsearch-analysis-vietnamese

Vietnamese Analysis Plugin for Elasticsearch