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3dmol.js

WebGL accelerated JavaScript molecular graphics library

biopython

Official git repository for Biopython (converted from CVS)

cn-lib-app

dwgsim

Whole Genome Simulator for Next-Generation Sequencing

edda

eg

WashU EpiGenome Browser

eg-3d-demo

Demo files for viewing 3D structure in WashU Epigenome Browser

eg-docs

WashU Epigenome Browser Documentation

eg-landing

eg-react

WashU Epigenome Browser

eg-serverless-api

Code to set up AWS lambda for eg

facet-test

g3d

Genomics 3D Visualizer

generic-filehandle

use a subset of the NodeJS promise-based file handle API to access both local and remote files

gmod-data-sources

using data fetching library by GMOD

hic-straw

Command line and web utilities for reading .hic contact matrix files

hubs

igv.js

Lightweight html5 version of the Integrative Genomics Viewer

iteres

Get repeat alignment statistic from BAM/SAM file

jqtouch

Create powerful mobile apps with just HTML, CSS, and Zepto.js (or jQuery).

kobas

KEGG-Orthology Based Annotation System

lidaof.github.io

lmod_setup

methylqa

methylation sequence data quality assessment tool

modbedtools

A python command line tool to generate modbed files for visualization on WashU Epigenome Browser

open-data-registry

A registry of publicly available datasets on AWS

plotly-test

portal

python-algorithms

Algorithms implemented in Python

pythonorf

find ORFs using Python and Biopython