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Name: Šikić lab
Type: Organization
Bio: A computational group with a focus on the development of new algorithms and AI models for the analysis of DNA and RNA sequencing data and biomolecular strucures
Location: Singapore
Name: Šikić lab
Type: Organization
Bio: A computational group with a focus on the development of new algorithms and AI models for the analysis of DNA and RNA sequencing data and biomolecular strucures
Location: Singapore
A framework for training graph neural networks to untangle assembly graphs obtained from OLC-based de novo genome assemblers.
Supplementary code for "Finding Hamiltonian cycles with graph neural networks"
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html https://www.biorxiv.org/content/10.1101/720458v1
Development of Raven - Heron branch
HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of >= 10 kbps is recommended).
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Telomere-to-Telomere diploid Indian Genome
A GNN model that executes simplification algorithms used in the layout phase of de novo genome assembly process.
Assembler for raw de novo genome assembly of long uncorrected reads.
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
De novo genome assembler for long uncorrected reads
RiboNucleic Acid (RNA) Language Model
A tool for evaluating RNA seq mapping
Deep learning based method for detecting DNA base modifications
A deep learning consensus polisher
SCARA - scaffolding with long reads
T2T assemblies of human and durian genomes
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.