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accelges

Automatically exported from code.google.com/p/accelges

alignment-tools

amr-dbqc

amr-nextflow

A Nextflow-based set of scripts for running the MEG Antimicrobial Resistance AmrPlusPlus pipeline

amr-scripts

Scripts used in the MEG pipelines

amrplusplus-shiny

Shiny app for running AMR++ analytic pipeline from the Microbial Ecology Group

asffast-container

Singularity container for ASF-FAST

asfv-genomes

African Swine Fever Genomes from ASFV DB

bear-wgs

USDA ARS BEARRU Whole Genome Sequencing Workflow

coverage_sampler

csu-cs-cluster

Scripts for running jobs on the computer science cluster at CSU

csu-sequencing-fall2019

16S Data Analysis for MIP565

csu_chronicwasting

csuthesis

Colorado State University LaTeX Thesis/Dissertation Template

cuda-half-testing

cuda-sandbox

Toy examples of CUDA kernels

erl-mare-microbiome

16S ribosomal DNA characterization of the reproductive tract microbiome in normal and infected Quarter Horse mares

fad-snp-utils

fast-mle-multinomials

Fast MLE for the Beta-Liouville Multinomial

file-parsing

gpu-utils

hquery

Windows GUI for batch queries to the HGNC gene database

iterative_feature_removal

Iterative Feature Removal is a feature selection mechanism that helps identify equivalently-predictive sets of features in data.

jhu_dataanalysis

kaggle-ensemble-guide

Code for the Kaggle Ensembling Guide Article on MLWave

kaggle-facebook-v

Second place solution for Facebook V competition on Kaggle

kaggle-ndsb

Winning solution for the National Data Science Bowl competition on Kaggle (plankton classification)

kingry

Repository for the data analysis of the Kingry et al. data set.

maxas

Assembler for NVIDIA Maxwell architecture

meg-bayesian-regression

Testing Bayesian regression MCMC techniques on resistome/microbiome data