kusandeep Goto Github PK
Name: Sandeep Kumar
Type: User
Company: Scientist @AgResearch, New Zealand
Bio: Scientist
Blog: https://scholar.google.com/citations?user=5uSOyvUAAAAJ&hl=en
Sandeep Kumar's Projects
2021-may-microbial-community-analysis
Use high-throughput sequencing (HTS) of amplicons to understand the composition and functional content of microbial communities.
asap
A scalable bacterial genome assembly, annotation and analysis pipeline
awesome-bioinformatics
A curated list of awesome Bioinformatics libraries and software.
bactopia
A flexible pipeline for complete analysis of bacterial genomes
be_iss_pangenomes
Data repo for our publication, "Pangenomic Approach To Understanding Microbial Adaptations within a Model Built Environment, the International Space Station, Relative to Human Hosts and Soil. mSystems 4:e00281-18."
calf-microbiome
This repository presents the files and methods used for statistical analyses of the faecal bacterial community profiles and SCFA data generated from calves raised on three different allowances of milk replacer.
microbiome_helper
An assortment of scripts to help process and automate various microbiome and metagenomic bioinformatic tools.
tools-microbiome-analysis
A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
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