kincekara Goto Github PK
Name: Kutluhan Incekara
Type: User
Company: Connecticut State Public Health Laboratory
Location: Rocky Hill, CT
Kutluhan Incekara's Projects
c-bird
:microbe: Bacterial Identification and Antimicrobial Resistance :pill:
cbird_mash_sketch
Custom reference sketch for c-bird pipeline
docker-builds
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
dockers
gbs_identification_and_typing
legioworld
Legionella WDL workflows
public_health_bioinformatics
Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.
pubmlst
Query contigs on PubMLST via RESTful API
rmlst
Species identification from contigs via rMLST
snvphyl_terra
Terra (WDL) version of SNVPhyl
terra_tools
Terra utilities
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