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bioconda-recipes

Conda recipes for the bioconda channel.

breakout-rl

Reinforcement learning for the game Breakout from Atari 2600

cageseq

CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.

camera-trap

Repository containing code for a Raspberry Pi camera trap project.

code4green

Repository for the code4green hackathon

data-model-lib

Libraries providing functionality for the QBiC/openBIS data model

demultiplexing

Quick NextFlow pipeline for demultiplexing samples using cutadapt

eve

Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

findcroc

Artificial Intelligence, lab 2

guppy-docker

Repository with Dockerfile for a Guppy basecaller container.

hybrid-assembly

Pipeline for hybrid assembly using short and long reads.

image-detection

Repository for image detection algorithm implementations

juliaml

Implementations of different algorithms to learn Julia

metadata-model-specification

QBiC's metadata model specification

mlf-core

Reproducible machine learning pipelines using mlflow.

mlfcore-test

models

Models and examples built with TensorFlow

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

multi-package-containers

Testing building mulled containers for multi-requirement tools.

nanor

R package for analysis of NanoString data

neural-style-transfer

Implementation of neural style transfer

nf-co.re

Files for the main nf-core website >>>

nf-core-testpipeline

A pipeline for testing

nf-salmon

Simple Nextflow Salmon pipeline

pytorch-playground

Playground for learning Pytorch

rimod-ftd

rl-car-training

Reinforcement learning trail for the CarRacing-v0 environment of the OpenAI gym.

rl-playground

Implementation and testing of different RL algorithms.

rstudio-dzne

Rstudio server instance for DZNE Tübingen

scaden

Deep Learning based cell composition analysis with Scaden.