Comments (2)
Hi
Thanks for the suggestion, I agree that it would be useful to be able to avoid having to invoke GCAE from the project directory.
Do you think it is important to be able to have the train_opts, data_opts and models in custom locations on the system, or would it work equally well to keep requiring them to be in the GCAE directory and re-writing the paths to be relative to project directory using e.g. (in run_gcae.py)
from pathlib import Path
GCAE_DIR = Path(__file__)
and assuming data_opts/ train_opts/ and models/ are in GCAE_DIR
from genocae.
Yay, thanks for appreciating my suggestion!
I think your suggestion is great and I look forward to using it :-)
from genocae.
Related Issues (20)
- Suggest + volunteer: text files are not executable HOT 4
- Suggest + volunteer: rename HumanOrigins249_tiny.eigenstratgeno to HumanOrigins249_tiny.bed HOT 2
- Conversion to PLINK format failed for .bed file HOT 3
- Suggest: improve CLI error messages HOT 1
- Idea: use Swish instead of ELU? HOT 1
- What is the cause for 'ValueError: Dimensions must be equal'? HOT 3
- Could AasaJohanssonUU be added as a Collaborator? HOT 3
- GCAE cannot run 'project' with a phenotype, how to fix? HOT 1
- GCAE gives error when running 'project' with a phenotype HOT 14
- Use 'project' without a 'HO_superpopulation' file HOT 4
- Use 'evaluate' without the `HO_superpopulation` file HOT 6
- Request: add a toy model setup HOT 3
- GenoCAE build fails due to upstream update HOT 1
- Docker script does not build anymore? HOT 4
- evaluate with superpops: how is the average calculated? HOT 2
- Docker building error due to python requirements HOT 1
- `2022-06-23 09:25:59.298713: W tensorflow/core/framework/cpu_allocator_impl.cc:82] Allocation of 19113388800 exceeds 10% of free system memory.` HOT 3
- Projecting non-population metadata HOT 6
- Extracting feature importance
- Error while building docker container
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from genocae.