kaeldai Goto Github PK

accumulate

code for calling mutatons from MA lines

allensdk

bmtk

Brain Modeling Toolkit

bmtk-tests

bmtk-workshop

cns_2018_tutorial

Material for CNS Tutorial on Allen Brain Observatory and BMTK

cns_2021

Resources for Allen Instutite tutorials presented at CNS 2021

conda_packages

denovogear

A program to detect denovo-variants using next-generation sequencing data. (http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html)

dipde

dipde_dev

docker-sisrs

Simple Dockerized SISRS Implementation

kms-wiki

mcmxlii

1942: an interactive art project and evolutionary simulation

mouse_l4_arkhipov

Original codebase for Mouse V1 Layer 4 network created by Allen Institute for Brain Science, shared under a BSD-3 license. Additional code for network optimization created by Aaron Milstein.

ndx-simulation-output

NWB:N 2.0 extension for output data of large-scale simulations

nest-simulator

The NEST simulator

nested

Nested parallel multi-objective optimization

networks_sig

INCF SIG on Standardised Representations of Network Structures

neuronunit

A package for data-driven validation of neuron and ion channel models using SciUnit

novo_muta

An implementation of probabilistic methods for detecting de novo mutations from nuclear family genome data

nrn

NEURON Simulator. (iv required for the GUI)

objectivemodelvalidation

Validation of Olfactory Bulb Mitral Cell models with data from NeuroElectro.org and using NeuronUnit framework

olfaction

pedigree_sim

scidash

A collection of candidates, tests, and records for use with SciDash.

sciunit

A framework for formal validation of scientific models.

sisrs

Site Identification from Short Read Sequences.

sonata

Collaboration between BBP and AIBS

swdb_2018

Course materials for the 2018 Summer Workshop on the Dynamic Brain