Comments (8)
What does using SparseDiffTools
give you?
from sparsedifftools.jl.
Only
Info: Precompiling SparseDiffTools [47a9eef4-7e08-11e9-0b38-333d64bd3804]
└ @ Base loading.jl:1242
Failed to precompile SparseDiffTools [47a9eef4-7e08-11e9-0b38-333d64bd3804] to /srv/julia/pkg/compiled/v1.2/SparseDiffTools/w4L8R.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1253
[3] _require(::Base.PkgId) at ./loading.jl:1013
[4] require(::Base.PkgId) at ./loading.jl:911
[5] require(::Module, ::Symbol) at ./loading.jl:906
[6] top-level scope at In[3]:2
from sparsedifftools.jl.
🤷♂ I need more to go on than that. I cannot reproduce given when you've shown. There's no error message or anything? Is this directly in the REPL?
from sparsedifftools.jl.
The error is only present in https://mybinder.org/ environment. With my local Julia 1.2.0 everything is fine. Only julia environments provisioned with mybinder fail to precompile OrdinaryDiffEq
due to SparseDiffTools
precompilation error. The error can be reproduces if you provision a simple notebook in mybinder
https://mybinder.org/v2/gh/davidanthoff/bindertest/master?filepath=src%2Fmain.ipynb
add a new cell and run:
using Pkg; Pkg.add("SparseDiffTools")
using SparseDiffTools
Other DiffEq
packages (e.x. DiffEqBase
) precompile in mybinder without errors
from sparsedifftools.jl.
It looks like I can isolate it to:
using Pkg; Pkg.add("BlockBandedMatrices"); using BlockBandedMatrices
which means it's upstream issue in BlockBandedMatrices.jl
from sparsedifftools.jl.
Yes, you are right, thanks! Latest versions of BlockBandedMatrices
fail to precompile in mybinder.
The latest working version is BlockBandedMatrices v.0.4.6
. How can I force OrdinaryDiffEq
and SparseDiffTools
to use BlockBandedMatrices v.0.4.6
in mybinder as a workaround?
I guess we can close the issue and "move" it to BlockBandedMatrices
?
from sparsedifftools.jl.
Yes, let's move it over to there. Please ping me because I'd like to continue to follow this. I am not sure what could be causing it, but if @dlfivefifty is doing fancy things with BLAS that might be doing it.
from sparsedifftools.jl.
Sure, JuliaLinearAlgebra/BlockBandedMatrices.jl#45
from sparsedifftools.jl.
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