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jshima's Projects

laboratory icon laboratory

A Python library for carefully refactoring critical paths (and a port of Github's Scientist)

medic icon medic

a Python 3 command-line tool to maintain a DB mirror of MEDLINE (https://pypi.python.org/pypi/medic)

medlinexmltodatabase icon medlinexmltodatabase

A command line Java application for parsing MEDLINE XML files and inserting the data into a relational database

music2 icon music2

identifying mutational significance in cancer genomes

sci icon sci

Gentoo Science Overlay

scientist icon scientist

Perl 5 Scientist - Test new code against old

umls2rdf icon umls2rdf

These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

virtuoso-opensource icon virtuoso-opensource

Virtuoso is a scalable cross-platform server that combines Relational, Graph, and Document Data Management with Web Application Server and Web Services Platform functionality.

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