jonperdomo Goto Github PK

bioconda-recipes

Conda recipes for the bioconda channel.

clion-remote

covid-progression-cnn

Classification of COVID-19 progression in CT image data using deep convolutional networks

dava

Image data visualization and analysis.

dlc-label-editor

Edit DeepLabCut labels from HDF files. Save edited files in both HDF and MATLAB file formats.

fasta-parser

Parses FASTA genome data files.

fictrac

FicTrac: A webcam-based method for tracking spherical motion and generating fictive animal paths.

glmspiketraintutorial

Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data

hdf5

Official HDF5® Library Repository

jonperdomo.github.io

My personal website.

openmht

Python module for multiple hypothesis tracking.

pluslib

Plus is an open-source software toolkit for data acquisition, pre-processing, and calibration for navigated image-guided interventions.

polytracker

Automatic landmark tracking software.

slicer

Multi-platform, free open source software for visualization and image computing.

slicerexecutionmodel

An open-source CMake-based project that provides macros and associated tools for the easy building of 3D Slicer command line interface (CLI) modules.

southroadlearning

Fun online learning games for students.

sv-phenotype-browser

List phenotypes with clinical significance from GRCh38-aligned data using corresponding data from the dbVar database. Class project for Drexel BMES 550.